Interventions0 sources
Probiotic Combination for CKD
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Search: “probiotic”
Ranked matches across titles, topics, categories, and article introductions.
80 records in this view
Mechanisms12 sources
Probiotics
Live microorganisms that, when administered in adequate amounts, confer a health benefit on the host. In the context of this wiki, probiotics are relevant both as therapeutic agents for metal-related diseases and as mediators of gut metal microbiome interactions. Their …
Interventions0 sources
Probiotics (General)
Research summary — not medical advice. This page synthesizes published research on a mechanism-level intervention. It is not a clinical recommendation. Consult a qualified healthcare provider before making any changes to diet, supplementation, or treatment.
Interventions0 sources
Probiotics (Lactobacillus + Bifidobacterium) for PCOS
Research summary — not medical advice. This page synthesizes published research on a mechanism-level intervention. It is not a clinical recommendation. Consult a qualified healthcare provider before making any changes to diet, supplementation, or treatment.
Interventions5 sources
Probiotics for ASD Dysbiosis
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Interventions0 sources
Probiotics for Hashimoto's Thyroiditis
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Interventions0 sources
Probiotics for Postpartum Depression
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Interventions2 sources
Probiotics with PPI Therapy for GERD
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Interventions0 sources
Dietary Fiber + Probiotics for Cerebral Palsy Constipation
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Interventions0 sources
Ferrichrome-Producing Probiotics
Research summary — not medical advice. This page synthesizes published research on a mechanism-level intervention. It is not a clinical recommendation. Consult a qualified healthcare provider before making any changes to diet, supplementation, or treatment.
Clinical cautions1 sources
STOP: Probiotics Without Stress Management in Ovarian Cancer
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Clinical cautions6 sources
STOP: Standard (Unselected) Probiotics for Endometriosis
Research summary -- not medical advice. This page synthesizes published research on why a commonly recommended intervention may be counterproductive in this specific clinical context. Consult a qualified healthcare provider before making any changes to treatment.
Clinical cautions3 sources
STOP: Wrong-Strain Probiotics for Schizophrenia Psychiatric Symptoms
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Analyses0 sources
The Probiotic Metal Sponge
Probiotics protect the gut barrier from heavy metal toxicity. Zhai et al. (2016) demonstrated that L. plantarum CCFM8610 protected intestinal epithelial cells from cadmium through a four-part mechanism: metal sequestration in the gut lumen, alleviation of oxidative stre…
Interventions2 sources
Vitamin D + Probiotic Combination for Schizophrenia
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Interventions1 sources
Vitamin D + Probiotic Synergy (Cross-Condition)
Research summary — not medical advice. This page synthesizes published research on a mechanism-level intervention. It is not a clinical recommendation. Consult a qualified healthcare provider before making any changes to diet, supplementation, or treatment.
Microorganisms8 sources
Akkermansia mucinicola
A Gram-negative, obligate anaerobic, mucin-degrading bacterium first isolated from human feces and formally described as a second species within the genus Akkermansia. Like its well-studied sister species akkermansia muciniphila, A. mucinicola colonizes the intestinal m…
Microorganisms8 sources
Akkermansia muciniphila
A Gram-negative, obligate anaerobic, mucin-degrading bacterium that colonizes the intestinal mucus layer and has emerged as one of the most important next-generation probiotics. A. muciniphila is consistently depleted in disease states associated with metal dyshomeostas…
Diseases20 sources
Alzheimer's Disease
The most common form of dementia, affecting an estimated 55 million people worldwide and projected to triple by 2050 zhang 2024 recent advances alzheimers mechanisms trials. Characterized by progressive memory loss, cognitive decline, amyloid-beta plaques, and neurofibr…
Metals31 sources
Arsenic
Arsenic is a metalloid and potent carcinogen (IARC Group 1) that ranks among the most widespread environmental toxicants affecting human health. An estimated 225 million people worldwide are chronically exposed through contaminated drinking water alone ghosh 2023 heavy …
Microorganisms6 sources
Bacillus
A Gram-positive, aerobic to facultatively anaerobic, spore-forming genus that bridges environmental and human microbiology. The genus encompasses both beneficial species (B. subtilis, B. coagulans as probiotics) and pathogens (B. cereus causing food poisoning, B. anthra…
Mechanisms4 sources
BDNF (Brain-Derived Neurotrophic Factor)
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Microorganisms4 sources
Bifidobacteriaceae
Bifidobacteriaceae is the family containing bifidobacterium and related genera (alloscardovia). It is the dominant family in the healthy infant gut and a significant commensal family in adults. Family-level depletion is documented in ASD (marked reduction of Actinobacte…
Microorganisms3 sources
Bifidobacteriales
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Microorganisms6 sources
Bifidobacterium
A genus of Gram-positive, obligate anaerobic bacteria that dominate the infant gut microbiome and remain important commensals throughout life. Bifidobacterium species are distinctive in the metallomics context because some species possess Ni-dependent urease -- an unusu…
Microorganisms3 sources
Bifidobacterium adolescentis
Bifidobacterium adolescentis is a Gram-positive, obligate anaerobic species within the phylum Actinobacteria and the dominant Bifidobacterium species in the adult human gut. It is a specialist degrader of resistant starch and dietary fiber, producing acetate and lactate…
Microorganisms4 sources
Bifidobacterium bifidum
Bifidobacterium bifidum is an obligate anaerobic, Gram-positive species that specializes in human milk oligosaccharide (HMO) and mucin glycan degradation. It is one of the earliest colonizers of the infant gut and a widely used probiotic species.
Microorganisms5 sources
Bifidobacterium breve
Bifidobacterium breve is a Gram-positive, obligate anaerobic species within the phylum Actinobacteria, predominantly found in the infant gut and breast milk. It is among the earliest colonizers of the neonatal intestine and plays a key role in human milk oligosaccharide…
Microorganisms5 sources
Bifidobacterium infantis
Bifidobacterium longum subsp. infantis (commonly called B. infantis) is the premier human milk oligosaccharide (HMO)-utilizing bacterium and the dominant species in the breastfed infant gut. It drives immune maturation, Treg induction, and pathogen exclusion in early li…
Microorganisms6 sources
Bifidobacterium longum
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Microorganisms4 sources
Butyricicoccus
A genus of Gram-positive, strictly anaerobic, butyrate-producing bacteria in the order Clostridiales (phylum Firmicutes). The type species, Butyricicoccus pullicaecorum, was originally isolated from chicken caecal content but has since been identified as a significant m…
Metals50 sources
Cadmium
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Diseases8 sources
Cerebral Palsy
Cerebral palsy (CP) is the most common motor disability in childhood, affecting 2-3 per 1,000 live births allen 2021 multi organ dysfunction cerebral palsy. Characterized by non-progressive disturbances in movement and posture arising from injury to the developing brain…
Microorganisms4 sources
Clostridium butyricum
Clostridium butyricum is a spore-forming, obligate anaerobic, Gram-positive bacterium and one of the leading next-generation probiotic candidates. The MIYAIRI 588 strain (CBM 588) is approved as a pharmaceutical probiotic in Japan and has expanding clinical evidence acr…
Microorganisms6 sources
Clostridium perfringens
Clostridium perfringens is a Gram-positive, strictly anaerobic, spore-forming bacterium infamous for causing gas gangrene, food poisoning, and necrotizing enterocolitis (NEC) in premature infants. It is one of the most widely distributed pathogenic bacteria in nature, f…
Diseases18 sources
Colorectal Cancer
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Mechanisms5 sources
Competitive Exclusion
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Diseases15 sources
Crohn's Disease
A chronic, relapsing-remitting inflammatory bowel disease (IBD) characterized by transmural inflammation of the gastrointestinal tract, most commonly affecting the terminal ileum and colon but capable of involving any segment from mouth to anus zhang 2017 intestinal mic…
Diseases10 sources
Depression
Depression is the most prevalent mental health disorder globally, affecting over 280 million people zhu 2025 microbiota gut brain axis depression review, and one of the most metal-sensitive conditions in this wiki. It sits at the convergence of nearly every pathway cata…
Host defenses4 sources
Dietary Iron and Gut Ecology
iron occupies a unique position among dietary metals: it is both an essential nutrient and a selective pressure that shapes the gut microbial ecosystem. The form, quantity, and bioavailability of dietary iron determines which microbes thrive and which are competitively …
Analyses31 sources
Dietary Metal Paradoxes: When Healthy Foods and Good Intentions Backfire
This page identifies the contradictions and clinical dilemmas that become visible only when the 236 source pages in this wiki are read together. Each paradox describes a situation where evidence-based dietary or supplementation advice -- advice that is correct for most …
Entity indexes8 sources
Dopamine
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Mechanisms14 sources
Dysbiosis
Disruption of the normal composition and metabolic function of microbial communities, particularly the gut microbiome. In the metallomics context, dysbiosis is both a consequence of metal toxicity and an amplifier of further disease -- creating vicious cycles where meta…
Interventions1 sources
E. coli Nissle 1917
Research summary — not medical advice. This page synthesizes published research on a mechanism-level intervention. It is not a clinical recommendation. Consult a qualified healthcare provider before making any changes to diet, supplementation, or treatment.
Diseases11 sources
Endometriosis
This knowledge-base record is being expanded from WikiBiome’s evidence graph.
Microorganisms7 sources
Faecalibacterium
Faecalibacterium is a genus of obligate anaerobic, Gram-positive bacteria in the family Ruminococcaceae (phylum Firmicutes). It is the most abundant genus in the healthy human colon (5–15% of fecal bacteria) and its depletion is the single most reproducible microbiome f…
Microorganisms8 sources
Faecalibacterium prausnitzii
The most abundant bacterium in the healthy human colon (5-15% of total fecal microbiota), F. prausnitzii is the premier butyrate producer in the gut and a cornerstone of anti-inflammatory intestinal homeostasis. Its depletion is one of the most consistent microbiome sig…
Interventions0 sources
Faecalibacterium prausnitzii Restoration
Research summary — not medical advice. This page synthesizes published research on a mechanism-level intervention. It is not a clinical recommendation. Consult a qualified healthcare provider before making any changes to diet, supplementation, or treatment.
Mechanisms4 sources
Fecal Microbiota Transplant (FMT)
The transfer of processed stool from a healthy donor into a recipient's gastrointestinal tract to restore a disrupted microbial community. FMT is the most direct form of microbiome intervention -- replacing the entire community rather than supplementing individual strai…
Diseases8 sources
Fibromyalgia
Fibromyalgia (FM) is a chronic pain syndrome affecting 2-4% of the global population Heidari et al. 2017, characterized by widespread musculoskeletal pain, fatigue, cognitive dysfunction ("fibro fog"), and sleep disturbances. Conventionally attributed to central sensiti…
Metals8 sources
Gallium
A group 13 post-transition metal (atomic number 31) with no known biological function in any organism — yet one of the most promising antimicrobial metals precisely because of what it cannot do. Ga3+ is nearly identical to Fe3+ in ionic radius (0.62 Å vs 0.645 Å) and co…
Reference0 sources
Glossary
Alphabetical definitions of specialist terms used throughout this wiki. Where a full concept page exists, the term links to it. --- AhR (aryl hydrocarbon receptor) -- A ligand-activated transcription factor that senses microbial metabolites (especially indoles from tryp…
Mechanisms22 sources
Gut-Metal-Microbiome Interactions
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Diseases15 sources
Hashimoto's Thyroiditis
This knowledge-base record is being expanded from WikiBiome’s evidence graph.
Microorganisms7 sources
Holdemanella
A genus of Gram-positive, strictly anaerobic bacteria in the family Erysipelotrichaceae (phylum Firmicutes) that is emerging as one of the most consistently protective gut commensals in human disease. Holdemanella is depleted across a striking range of conditions -- inf…
Interventions0 sources
L. rhamnosus GG Early-Life Supplementation for T1D Prevention
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Microorganisms5 sources
Lactobacillaceae
Lactobacillaceae is the family containing the genus lactobacillus and related genera. It is the dominant family in the healthy vaginal microbiome and a significant family in the gut. Family-level depletion is reported across schizophrenia szeligowski 2020 gut microbiome…
Microorganisms9 sources
Lactobacillus
A genus of Gram-positive, facultatively anaerobic lactic acid bacteria (LAB) that are among the most extensively studied probiotics. In the metallomics context, Lactobacillus species are critical for two reasons: they actively detoxify heavy metals through binding and s…
Microorganisms6 sources
Lactobacillus acidophilus
Lactobacillus acidophilus is one of the most widely used probiotic species, with clinical trial evidence spanning multiple conditions. It is a component of many multi-strain probiotic formulations and has been tested in RCTs for schizophrenia, breast cancer chemotherapy…
Microorganisms6 sources
Lactobacillus gasseri
Lactobacillus gasseri is a vaginal and gut commensal that defines Community State Type II (CST-II) in the vaginal microbiome. It is a common probiotic species with anti-obesity properties in clinical trials.
Microorganisms5 sources
Lactobacillus plantarum
Lactobacillus plantarum is one of the most versatile probiotic species — found in fermented foods (kimchi, sauerkraut, sourdough), the human gut, and the vaginal microbiome. It has the largest genome among Lactobacillus species (~3.3 Mb), encoding extensive stress toler…
Microorganisms6 sources
Lactobacillus reuteri
Lactobacillus reuteri is one of the most extensively studied probiotic species, notable for its production of neuroactive metabolites (GABA, histamine) and its effects on the hypothalamic-pituitary-gonadal axis (testosterone, oxytocin).
Microorganisms6 sources
Lactobacillus rhamnosus
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Microorganisms6 sources
Lactococcus
Lactococcus lactis is a Gram-positive, facultatively anaerobic, lactic acid bacterium best known as the workhorse of the dairy fermentation industry. It holds GRAS (Generally Recognized As Safe) status and has emerged as a versatile platform for probiotic and therapeuti…
Interventions0 sources
Lactoferrin + L. rhamnosus GG for NEC Prevention
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Interventions29 sources
Low-Nickel Diet
Research summary — not medical advice. This page synthesizes published research on a mechanism-level intervention. It is not a clinical recommendation. Consult a qualified healthcare provider before making any changes to diet, supplementation, or treatment.
Interventions3 sources
Multi-Strain Synbiotic for Schizophrenia
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Diseases5 sources
Multiple Sclerosis
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Diseases18 sources
Necrotizing Enterocolitis
Necrotizing enterocolitis (NEC) is the most common and lethal gastrointestinal emergency in premature infants, affecting 5-12% of very low birth weight neonates (<1500 g) with mortality rates of 20-30%. Characterized by intestinal inflammation, necrosis, and perforation…
Diseases11 sources
Obesity
A chronic metabolic condition affecting over 1 billion people globally, characterized by excess adipose tissue accumulation, systemic low-grade inflammation, and gut microbiome disruption pendergrass 2026 heavy metals obesity epidemic. From a metallomics perspective, ob…
Microorganisms6 sources
Oscillospiraceae
A family of Gram-positive obligate anaerobes (formerly classified as the genus Oscillospira, now reclassified into Oscillibacter and related genera within Oscillospiraceae) that serve as keystone butyrate producers in the healthy human distal colonic microbiota (Konikof…
Diseases6 sources
Ovarian Cancer
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Other0 sources
Oxalobacter
--- title: Oxalobacter type: entity subtype: microbe created: 2026-04-10 updated: 2026-04-16 lastsubstantiveupdate: 2026-04-16 sources: [duan-2020-gut-microbiota-heavy-metal-probiotic-strategy, zhang-2022-causal-gut-microbiome-cvd-mr, dai-2024-gut-microbiota-cvd-bidirec…
Mechanisms24 sources
Oxidative Stress
Oxidative stress is the imbalance between the production of reactive oxygen and nitrogen species (ROS/RNS) and the capacity of biological antioxidant defense systems to detoxify them. It is the single most commonly invoked mechanism across metal toxicology in this wiki,…
Diseases22 sources
Pancreatic Cancer
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Diseases5 sources
Pancreatitis
This knowledge-base record is being expanded from WikiBiome’s evidence graph.
Diseases14 sources
Parkinson's Disease
The second most common neurodegenerative disease, affecting over 10 million people worldwide dorsey 2018 parkinsons incidence meta analysis. Characterized by progressive loss of dopaminergic neurons in the substantia nigra, alpha-synuclein aggregation (Lewy bodies), and…
Diseases22 sources
Polycystic Ovary Syndrome
A metabolic-endocrine disorder affecting 6-20% of reproductive-age women worldwide, characterized by hyperandrogenism, oligo/anovulation, and polycystic ovary morphology (Rotterdam criteria) barrea 2019 mediterranean diet pcos. PCOS is the leading cause of anovulatory i…
Diseases13 sources
Postpartum Depression
This knowledge-base record is being expanded from WikiBiome’s evidence graph.
Mechanisms3 sources
Prebiotics
Non-digestible food substrates that selectively stimulate the growth and/or activity of beneficial gut microorganisms, conferring health benefits to the host. Distinct from probiotics (live organisms) and postbiotics (microbial metabolic products), prebiotics act as fue…